2025 Bioinformatics Symposium - Revision history

Mazumder at 11:49, 29 April 2025

2025-04-29T11:49:43Z

← Older revision		Revision as of 11:49, 29 April 2025
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	'''When''': April 29th 2025, 9am to 6pm		'''When''': April 29th 2025, 9am to 6pm

	'''Venue''': Talks: SEH B1220. Refreshments, lunch, and posters: Green wall area (SEH B1167)		'''Venue''': Talks: SEH B1220. Refreshments, lunch, and posters: Green wall area (SEH B1167). '''GWorld card required for entry.'''

	Join us for a full-day, all-hands GW Bioinformatics Symposium featuring posters, talks, and roundtable discussions. Open to GW students, staff, and faculty!		Join us for a full-day, all-hands GW Bioinformatics Symposium featuring posters, talks, and roundtable discussions. Open to GW students, staff, and faculty!

Mazumder: /* Logistics Organizing Committee */

2025-04-28T19:48:44Z

Logistics Organizing Committee

← Older revision		Revision as of 19:48, 28 April 2025
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	== Logistics Organizing Committee ==		== Logistics Organizing Committee ==

	Raja Mazumder, Anelia Horvath, Raechelle McCants, Jewel ~~Das~~. Student volunteers: Jane, Sofia, Allison, Chloe, Trupri and Lincoln.		Raja Mazumder, Anelia Horvath, Raechelle McCants, Jewel Dias. Student volunteers: Jane, Sofia, Allison, Chloe, Trupri and Lincoln.

	== Talk Titles ==		== Talk Titles ==

Mazumder: /* Schedule (Talk Titles) */

2025-04-28T18:29:33Z

Schedule (Talk Titles)

← Older revision		Revision as of 18:29, 28 April 2025
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	** Funding opportunities		** Funding opportunities
	*Games		*Games
			*Poster prizes
	\|Clark Gaylord (Director, Research Technology Services)		\|Clark Gaylord (Director, Research Technology Services)
	Brian Choi (MFA)		Brian Choi (MFA)
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	\|4:30 - 6:00 PM		\|4:30 - 6:00 PM
	\|		\|
	\|Networking event~~, poster prizes,~~ and refreshments		\|Networking event and refreshments
	\|Anelia Horvath		\|Anelia Horvath
	Jonathon Keeney		Jonathon Keeney

Mazumder: /* Schedule (Talk Titles) */

2025-04-28T18:28:07Z

Schedule (Talk Titles)

← Older revision		Revision as of 18:28, 28 April 2025
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	** Careers in bioinformatics		** Careers in bioinformatics
	** Funding opportunities		** Funding opportunities
			*Games
	\|Clark Gaylord (Director, Research Technology Services)		\|Clark Gaylord (Director, Research Technology Services)
	Brian Choi (MFA)		Brian Choi (MFA)

Mazumder at 16:11, 28 April 2025

2025-04-28T16:11:42Z

← Older revision		Revision as of 16:11, 28 April 2025
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	\|Ishita Chopra		\|Ishita Chopra
	\|Characterizing Cell Interaction and Gene Expression		\|Characterizing Cell Interaction and Gene Expression
			\|-
			\|Luke Johnson
			\|scSNViz: a user-friendly R package for visualization and analysis of cell specific expressed SNVs
	\|}		\|}
	<nowiki>*</nowiki>Flash talks		<nowiki>*</nowiki>Flash talks

Mazumder at 13:47, 28 April 2025

2025-04-28T13:47:08Z

← Older revision		Revision as of 13:47, 28 April 2025
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	2. Ljubica Caldovic (Children’s)		2. Ljubica Caldovic (Children’s)

	3. ~~Dae Young Kim~~ (Children’s~~; Muhammad Rahman lab~~)		3. Muhammad Rahman (Children’s)

	4. Seth Berger (Children’s)		4. Seth Berger (Children’s)

Mazumder: /* Poster Presentations */

2025-04-26T12:47:39Z

Poster Presentations

← Older revision		Revision as of 12:47, 26 April 2025
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	\|Investigating the role of bacteriophage diversity in Hawaiian steam vent microbial communities		\|Investigating the role of bacteriophage diversity in Hawaiian steam vent microbial communities
	\|-		\|-
	\|Emily Williams*		\|Emily Williams
	\|TRIM28 regulates endogenous retroviral element expression in prostate cancer		\|TRIM28 regulates endogenous retroviral element expression in prostate cancer
	\|-		\|-
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	\|Characterizing Cell Interaction and Gene Expression		\|Characterizing Cell Interaction and Gene Expression
	\|}		\|}
			<nowiki>*</nowiki>Flash talks

Mazumder: /* Poster Presentations */

2025-04-26T12:47:07Z

Poster Presentations

Mazumder: /* Poster */

2025-04-26T12:20:43Z

Poster

← Older revision		Revision as of 12:20, 26 April 2025
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	== Poster ==		== Poster ==
			'''Poster setup: Poster numbers and poster category (AI/ML, Bioinformatics) will be distributed during registration.'''

	Participants are invited to submit a brief poster abstract by March 31st at 11:59 PM (ET). We encourage submissions from bioinformatics labs and also other labs that do not primarily focus on bioinformatics but have research relevant to bioinformatics topics. A select few will be chosen for lightning talks. Due to the limited number of poster boards, priority will be given to ensure each lab/group has at least one designated board. If the number of submitted poster abstracts exceeds the available poster boards, additional posters may be printed as flyers with QR codes, enabling attendees to scan, view, or download them electronically.		Participants are invited to submit a brief poster abstract by March 31st at 11:59 PM (ET). We encourage submissions from bioinformatics labs and also other labs that do not primarily focus on bioinformatics but have research relevant to bioinformatics topics. A select few will be chosen for lightning talks. Due to the limited number of poster boards, priority will be given to ensure each lab/group has at least one designated board. If the number of submitted poster abstracts exceeds the available poster boards, additional posters may be printed as flyers with QR codes, enabling attendees to scan, view, or download them electronically.

Mazumder: /* Poster Presentations */

2025-04-26T12:20:05Z

Poster Presentations

Show changes

← Older revision		Revision as of 12:47, 26 April 2025
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	\| Dae Young Kim \|\| mhGPT: A Lightweight Domain-Specific Language Model for Mental Health Analysis		\| Dae Young Kim \|\| mhGPT: A Lightweight Domain-Specific Language Model for Mental Health Analysis
	\|-		\|-
	\| Vania Ballesteros Prieto \|\| Uncovering the Contributions of Expressed Genetic Variants, Isoforms, and RNA Editing to Tumor Heterogeneity via Long-Read Single-Cell RNA-Seq Analysis		\| *Vania Ballesteros Prieto \|\| Uncovering the Contributions of Expressed Genetic Variants, Isoforms, and RNA Editing to Tumor Heterogeneity via Long-Read Single-Cell RNA-Seq Analysis
	\|-		\|-
	\| Sarah Tiufekchiev-Grieco \|\| Promoting Resolution of Inflammation as a Potential Therapy for DMD		\| Sarah Tiufekchiev-Grieco \|\| Promoting Resolution of Inflammation as a Potential Therapy for DMD
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	\| Christie Rose Woodside \|\| Bridging Genomics and Preparedness: Regulatory-Grade Genomics and Quality Control Metrics and Analysis for Emerging and Circulating Avian Influenza in 2024-2025		\| Christie Rose Woodside \|\| Bridging Genomics and Preparedness: Regulatory-Grade Genomics and Quality Control Metrics and Analysis for Emerging and Circulating Avian Influenza in 2024-2025
	\|-		\|-
	\| Aiste Gulla, MD, PhD \|\| Clinical Outcomes and Long-Term Survival of Pancreatic Cancers by Histological Sub-Type in the Epic Cosmos Database: Results from 2010-2025		\| *Aiste Gulla, MD, PhD \|\| Clinical Outcomes and Long-Term Survival of Pancreatic Cancers by Histological Sub-Type in the Epic Cosmos Database: Results from 2010-2025
	\|-		\|-
	\| Jane Ulianova \|\| Comparison of alignment performance between the T2T-CHM13 and GRCh38/hg38 reference genome assemblies for RNAseq		\| *Jane Ulianova \|\| Comparison of alignment performance between the T2T-CHM13 and GRCh38/hg38 reference genome assemblies for RNAseq
	\|-		\|-
	\| Zhe Yu \|\| Automated Tracking of Freezing Behavior in Paired House Mice Using DeepLabCut		\| Zhe Yu \|\| Automated Tracking of Freezing Behavior in Paired House Mice Using DeepLabCut
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	\| Karim Ismat \|\| Generation of a single nuclei RNA sequencing atlas of dysferlin-deficient skeletal muscle		\| Karim Ismat \|\| Generation of a single nuclei RNA sequencing atlas of dysferlin-deficient skeletal muscle
	\|-		\|-
	\| Kai Leung (Adam) Wong \|\| An Experience of carrying out GPU-accelerated Genomic Analysis on Pegasus		\| *Kai Leung (Adam) Wong \|\| An Experience of carrying out GPU-accelerated Genomic Analysis on Pegasus
	\|-		\|-
	\| Gabriel Batzli \|\| Defining macrophage heterogeneity in murine skin wounds during inflammation		\| Gabriel Batzli \|\| Defining macrophage heterogeneity in murine skin wounds during inflammation
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	\|Gut Microbiome Composition as an Indicator of Preclinical Alzheimer's Disease		\|Gut Microbiome Composition as an Indicator of Preclinical Alzheimer's Disease
	\|-		\|-
	\|Chelcie Puetz		\|*Chelcie Puetz
	\|Combined Neuroinflammatory and Neurovascular Molecular Screening for Early Detection of Blood-Brain Barrier Dysfunction in Patients with Traumatic Brain Injury		\|Combined Neuroinflammatory and Neurovascular Molecular Screening for Early Detection of Blood-Brain Barrier Dysfunction in Patients with Traumatic Brain Injury
	\|-		\|-