Additional ARGOS Reviewed Organisms

This page highlights organisms that were selected, reviewed, and added to ARGOSDB that are external to the FDA-ARGOS BioProject PRJNA231221. The QC and metadata information for these organisms can be found in these tables on data.argosdb.org:

- assemblyQC_ARGOS

- biosampleMeta_ARGOS

- ngsQC_ARGOS

Organism List

Organisms that have been QC'd need to be reviewed:

- Influenza A (H3N2) 2022

- Influenza A (H1N1) 2022

- Influenza A (Puerto Rico H1N1) reference genome

- Monkeypox Virus (WRAIR 761)

- Monkeypox Virus (USA2003(

- Human immunodeficiency virus type 1

- Orthomarburgvirus marburgense (isolate Ravn virus/H.sapiens-tc/KEN/1987/Kitum Cave-810040)

- Lake Victoria marburgvirus (Angola2005 strain Ang1379c)

- Marburg virus (Musoke Kenya 1980 for SAMN11077998)

- Marburg virus (Musoke Kenya 1980 for SAMN16357613)

- Lake Victoria marburgvirus (Ci67)

- Sudan ebolavirus (Gulu)

- Severe acute respiratory syndrome coronavirus 2 (Omicron/XBB.1.5 SARS-CoV-2/human/USA/CA-CDC-STM-S85G6U7MH/2023)

- Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2/human/USA/WA-CDC-02982586-001/2020)

- Severe acute respiratory syndrome coronavirus 2 (isolate Wuhan-Hu-1)

- Candidozyma auris

Organisms that were selected, but have not been QC'd due to missing data information:

- Middle East respiratory syndrome related coronavirus (EMC/2012)

- Middle East respiratory syndrome related coronavirus (VR-3248SD)

- Middle East respiratory syndrome related coronavirus (IRF0021 MERS JOR)

- Middle East respiratory syndrome related coronavirus (IRF0038 MERS EMC)

- Severe acute respiratory syndrome coronavirus 2 (Delta/B.1.617.2)

- Severe acute respiratory syndrome coronavirus 2 (Omicron/B.1.1.529)

- Severe acute respiratory syndrome coronavirus 2 (Beta/B.1.351)

- Severe acute respiratory syndrome coronavirus 2 (Alpha/B.1.1.7)

- Severe acute respiratory syndrome coronavirus 2 (Gamma/P.1)