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Combined display of all available logs of HIVE Lab. You can narrow down the view by selecting a log type, the username (case-sensitive), or the affected page (also case-sensitive).

• 06:41, 23 November 2024 Vishal.bakshi talk contribs uploaded File:McNeely.Patrick.jpg
• 06:39, 23 November 2024 Vishal.bakshi talk contribs created page File:Robel.Kahsay.jpg
• 06:39, 23 November 2024 Vishal.bakshi talk contribs uploaded File:Robel.Kahsay.jpg
• 06:38, 23 November 2024 Vishal.bakshi talk contribs created page People (Created page with "<h2> GW Faculty </h2> 150px|thumb|left|Raja Mazumder, Professor")
• 06:35, 23 November 2024 Vishal.bakshi talk contribs created page File:Raja-Mazumder.png
• 06:35, 23 November 2024 Vishal.bakshi talk contribs uploaded File:Raja-Mazumder.png
• 06:02, 23 November 2024 Vishal.bakshi talk contribs created page File:Intro HIVE Lab.png
• 06:02, 23 November 2024 Vishal.bakshi talk contribs uploaded File:Intro HIVE Lab.png
• 05:41, 23 November 2024 Vishal.bakshi talk contribs uploaded a new version of File:HIVELab Logo.png
• 05:38, 23 November 2024 Vishal.bakshi talk contribs created page Dataset Resources (Created page with "<h1>HIVE Team Datasets</h1> <!-- BCO HCV --> <h2>BCO HCV</h2> <p> We demonstrated that the use of the IEEE 2791-2020 Standard, (BioCompute objects [BCO]) enables complete and concise communication of NGS data analysis results. One arm of a clinical trial4 was replicated using synthetically generated data made to resemble real biological data. Two separate, independent analyses were then carried out using BCOs as the tool for communication of analysis: one to simulat...")
• 20:40, 22 November 2024 Vishal.bakshi talk contribs created page Projects (Created page with "{{DISPLAYTITLE:<span style="position: absolute; clip: rect(1px 1px 1px 1px); clip: rect(1px, 1px, 1px, 1px);">{{FULLPAGENAME}}</span>}} __NOTOC__ <!-- BANNER ACROSS TOP OF PAGE --> <div id="ggw-topbanner" style="clear:both; position:relative; box-sizing:border-box; width:100%; margin:1.2em 0 6px; min-width:47em; border:1px solid #ddd; background-color:#f9f9f9; color:#000;"> <div style="margin:0.4em; text-align:center;"> <div style="font-size:160%; padding:.1e...")
• 20:08, 22 November 2024 Skim658 talk contribs created page File:Glygen.png
• 20:08, 22 November 2024 Skim658 talk contribs uploaded File:Glygen.png
• 20:06, 22 November 2024 Skim658 talk contribs created page File:HIVELab Logo.png
• 20:06, 22 November 2024 Skim658 talk contribs uploaded File:HIVELab Logo.png
• 16:54, 22 November 2024 Lorikrammer talk contribs moved page FEAST-ARPA-H to GW-FEAST
• 16:32, 22 November 2024 Hivelabwikiadmin talk contribs created page Main Page/test (Created page with "{{DISPLAYTITLE:<span style="position: absolute; clip: rect(1px 1px 1px 1px); clip: rect(1px, 1px, 1px, 1px);">{{FULLPAGENAME}}</span>}} __NOTOC__ <!-- BANNER ACROSS TOP OF PAGE --> <div id="ggw-topbanner" style="clear:both; position:relative; box-sizing:border-box; width:100%; margin:1.2em 0 6px; min-width:47em; border:1px solid #ddd; background-color:#f9f9f9; color:#000;"> <div style="margin:0.4em; text-align:center;"> <div style="font-size:160%; padding:.1e...")
• 14:57, 22 November 2024 Hivelabwikiadmin talk contribs changed group membership for Vishal.bakshi from (none) to administrator, interface administrator and bureaucrat
• 16:06, 13 November 2024 User account Daniallmasood talk contribs was created by Hivelabwikiadmin talk contribs and password was sent by email (To maintain Wiki page)
• 16:04, 13 November 2024 User account Cyruschauyeung talk contribs was created by Hivelabwikiadmin talk contribs and password was sent by email (To maintain Wiki page)
• 16:02, 13 November 2024 User account Rykahsay talk contribs was created by Hivelabwikiadmin talk contribs and password was sent by email (To maintain Wiki page)
• 15:57, 13 November 2024 User account Mfmmazumder talk contribs was created by Hivelabwikiadmin talk contribs and password was sent by email (To maintain Wiki page)
• 15:55, 13 November 2024 User account Christie.woodside talk contribs was created by Hivelabwikiadmin talk contribs and password was sent by email (To maintain Wiki page)
• 15:54, 13 November 2024 User account Keeneyjg talk contribs was created by Hivelabwikiadmin talk contribs and password was sent by email (To maintain Wiki page)
• 15:52, 13 November 2024 User account Pmcneely talk contribs was created by Hivelabwikiadmin talk contribs and password was sent by email (To maintain Wiki page)
• 15:51, 13 November 2024 User account Urnisha.bhuiyan talk contribs was created by Hivelabwikiadmin talk contribs and password was sent by email (To maintain Wiki page)
• 15:50, 13 November 2024 User account Twang9 talk contribs was created by Hivelabwikiadmin talk contribs and password was sent by email (To maintain Wiki page)
• 15:49, 13 November 2024 User account Jeetvora talk contribs was created by Hivelabwikiadmin talk contribs and password was sent by email (To maintain Wiki page)
• 15:48, 13 November 2024 User account Maria.kim talk contribs was created by Hivelabwikiadmin talk contribs and password was sent by email (To maintain Wiki page)
• 15:46, 13 November 2024 User account Kate.Warner talk contribs was created by Hivelabwikiadmin talk contribs and password was sent by email (To maintain Wiki page)
• 15:42, 13 November 2024 Hivelabwikiadmin talk contribs renamed user Lori.krammer (0 edits) to Lorikrammer (For continuity purpose)
• 15:37, 12 November 2024 User account Lorikrammer talk contribs was created by Hivelabwikiadmin talk contribs and password was sent by email (To maintain Wiki page)
• 15:33, 12 November 2024 User account Emily.pennington talk contribs was created by Hivelabwikiadmin talk contribs and password was sent by email (To maintain Wiki page)
• 17:48, 8 November 2024 User account Mazumder talk contribs was created by Hivelabwikiadmin talk contribs (To maintain Wiki page)
• 20:38, 25 October 2024 User account Vishal.bakshi talk contribs was created by Hivelabwikiadmin talk contribs (To maintain Wiki page)
• 14:25, 25 October 2024 Skim658 talk contribs created page User:Skim658 (Created page with "Sean Kim")
• 14:22, 25 October 2024 User account Skim658 talk contribs was created by Hivelabwikiadmin talk contribs
• 14:12, 25 October 2024 User account SeanKim talk contribs was created by Hivelabwikiadmin talk contribs and password was sent by email
• 14:10, 25 October 2024 User account MazumderLab talk contribs was created by Hivelabwikiadmin talk contribs and password was sent by email
• 14:09, 25 October 2024 User account VishalBakshi talk contribs was created by Hivelabwikiadmin talk contribs and password was sent by email
• 14:08, 25 October 2024 User account RajaMazumder talk contribs was created by Hivelabwikiadmin talk contribs and password was sent by email
• 14:42, 17 October 2024 Hivelabwikiadmin talk contribs created page Major updates to the BioXpress from the previous version (v-4.0) (Created page with "== Tumor Samples Added for Each Tissue == {| class="wikitable" ! Tissue !! TCGA Studies !! New Samples |- | Bladder || BLCA || 126 |- | Breast || BRCA || 159 |- | Colorectal || COAD/READ || 159 (141/18) |- | Esophageal || ESCA || 25 |- | Head and Neck || HNSC || 118 |- | Kidney || KICH/KIRP/KIRC || 289 (15/82/192) |- | Liver || LIHC || 169 |- | Lung || LUAD/LUSC || 264 (174/90) |- | Prostate || PRAD || 116 |- | Stomach || STAD || 22 |- | Thyroid || THCA || 176 |- | Uteri...")
• 14:59, 16 October 2024 Hivelabwikiadmin talk contribs created page BioXpress pipeline README (Created page with "hi")
• 22:47, 9 October 2024 Hivelabwikiadmin talk contribs created page Additional Notes - tcga (Created page with "=== Additional Notes === All the mapping files are available in the repository folder: `pipeline/convert_step2/mapping` The mapping files used for converting TCGA are: '''DOID:''' * `tcga_doid_mapping.csv` TCGA Projects were mapped to DOID parent terms using the following table (generated from previous Biomuta mapping): {| class="wikitable" ! DO_slim_id ! DO_slim_name ! TCGA_project |- | DOID:5041 | esophageal cancer | TCGA-ESCA |- | DOID:2531 | hematologic cancer |...")
• 22:06, 9 October 2024 Hivelabwikiadmin talk contribs created page Additional notes- CIVIC (Created page with "=== Additional Notes === All the mapping files are available in the scripts repository in the folder: `pipeline/convert_step2/mapping` The mapping files used for converting CIVIC are: '''DOID:''' * `tcga_doid_mapping.csv` CIVIC DOID child terms were mapped to DOID parent terms using the following table (generated from the OncoMX DOID mapping table): {| class="wikitable" ! CIVIC Entity Disease |- | Acral_Lentiginous_Melanoma_(DOID_6367) |- | Acute_Lymphoblastic_Leukem...")
• 22:02, 9 October 2024 Hivelabwikiadmin talk contribs created page Additional Notes for COSMIC (Created page with "=== Additional Notes === All the mapping files are available in the scripts repository in the folder: `pipeline/convert_step2/mapping` The mapping files used for converting the COSMIC tsv are: '''DOID:''' * `cosmic_doid_mapping.csv` COSMIC tissue site terms were mapped to DOID parent terms using the following table (generated from previous Biomuta mapping): {| class="wikitable" ! Primary Site ! Top_Level_Organ_system |- | NS | NA |- | adrenal_gland | DOID:3953 / adre...")
• 21:56, 9 October 2024 Hivelabwikiadmin talk contribs created page Final Fields (Created page with "=== Additional Notes === ==== Final fields ==== {| class="wikitable" ! Field ! Description |- | sample_name | Sample ID provided by the original resource (for v-5.0 only applies to TCGA and COSMIC) |- | chr_id | Chromosome number only (no ‘chr’) |- | start_pos | Genomic coordinates (For v-5.0 these are all with ref GRCh38) |- | end_pos | Identical to the start position because all mutations are Specifications |- | ref_nt | Reference nucleotide |- | alt_nt | Nucleot...")
• 21:33, 9 October 2024 Hivelabwikiadmin talk contribs created page Common fields for VCF files (Created page with " {| class="wikitable" ! Field ! Description |- | Chrom | chromosome that the variation is being called on |- | Pos | base position of the variant |- | ID | identifier of the variant |- | Ref | reference base at the position of variance |- | Alt | alternate alleles at the position |- | Qual | quality score of the given alleles |- | Filter | indicates which set of filters failed or passed |- | Info | descriptions of the variation |- | Format | (optional) fields describing...")
• 21:23, 9 October 2024 Hivelabwikiadmin talk contribs created page Additional Notes (Created page with "=== Additional Notes === All the mapping files are available in the scripts repository in the folder: `pipeline/convert_step2/mapping` The mapping files used for converting the COSMIC tsv are: '''DOID:''' * `cosmic_doid_mapping.csv` COSMIC tissue site terms were mapped to DOID parent terms using the following table (generated from previous Biomuta mapping): {| class="wikitable" ! Primary Site ! Top_Level_Organ_system |- | NS | NA |- | adrenal_gland | DOID:3953 / adre...")
• 21:04, 9 October 2024 Hivelabwikiadmin talk contribs created page Additional notes (Created page with "Additional notes")