Tool Resources

Tools/Applications

GW HIVE - GW instance of the High-performance Integrated Virtual Environment (PMID: 25271953; 26989153)

AWS HIVE - AWS instance of the High-performance Integrated Virtual Environment (PMID: 25271953; 26989153)

BioCompute Objects Portal (BCOP) - Portal for making BioCompute objects

PhyloSNP - generate phylogenetic trees from single-nucleotide variation data (PMID: 24930720)

CensuScope - detect taxonomic composition of a metagenomic data set (PMID: 25336203)

PredictMod - A machine-learning-based platform for tools that predict patient-based clinical outcomes (PMID: 33814114)

Resources

BioMuta - browse human disease associated single-nucleotide variations (PMID: 24667251)

BioXpress - is a curated gene expression and disease association database. (PMID: 25819073)

Gut Feeling Knowledge Base - Gut feeling knowledgebase is a reference database of healthy human gut microbiome. (DOI:10.1371/journal.pone.0206484)

FilteredNT

OncoMX - KB of unified cancer genomics data from integrated mutation, expression, literature, and biomarker databases, accessible through web portal

GlyGen - data integration and dissemination project for carbohydrate and glycoconjugate related data.