Final Fields
Additional Notes
Final fields
| Field | Description |
|---|---|
| sample_name | Sample ID provided by the original resource (for v-5.0 only applies to TCGA and COSMIC) |
| chr_id | Chromosome number only (no ‘chr’) |
| start_pos | Genomic coordinates (For v-5.0 these are all with ref GRCh38) |
| end_pos | Identical to the start position because all mutations are Specifications |
| ref_nt | Reference nucleotide |
| alt_nt | Nucleotide mutation |
| aa_pos | Amino acid number of the amino acid change in the human_protein_transcriptlocus |
| ref_aa | Reference amino acid |
| alt_aa | Amino acid variation caused by the mutation |
| do_name | DO parent term |
| uniprot_canonical_ac | Uniprot accession for the specific ENST or ENSP listed from the source |
| source | Original data source of the mutation |